A Beretta 92F was seen in "I'm Just Searching" when the rigged conference table's surface flips up to show the pistol in front of Yasutaro Mihara.
Glock 17
A Glock 17 was seen in "I'm Just Searching" when the conference table was rigged to flip down and up to show the pistol in front of Fuwa.
Heckler & Koch USP
Heckler & Koch USP pistols are prominent in the Episode 0 movie, both in the hands of ex-JGSDF officer and Bettenou user Makiro Serada and Public Security Force operators when they are still contractors as their main sidearm.
SIG-Sauer P232
A SIG-Sauer P232 was used by a Security Police officer in "Murder at the Ball" before she was killed. Public Prosecutor Office agents sent to the Sasa estate in "House, Unmasked" use P232s as their main sidearms. Shinjuro and Inga criticize them for carrying firearms, which is correct since actual Public Prosecutor employees, regardless of their status, are not lawfully allowed by the Ministry of Justice to be armed. However, this may be due to the fact that in the Un-Go world, Japan had just been through a major war with several terrorist attacks that the MOJ had allowed all law enforcement personnel including Public Prosecutor employees to have pistols with them for protection in light of another terrorist attack.
Tokarev TT-33
What resembles a TT-33 is shown in a fake propaganda video planted by Makiro Senda showing the execution of an employee from Nonprofit Organization Singing in the Battlefield.
Walther PPK
A stainless Walther PPK is used by Seigen Hayami in the OP/ED sequence of Un-Go. It's also seen in his hands in "The King of Paradise" and in "I'm Just Searching", as well as in the Episode 0 movie.
Revolvers
New Nambu Model 60
The New Nambu Model 60 is used by Japanese police officers, notably officers from the Tokyo Metropolitan Police Department as their main sidearm. In reality, they use the Model 60 as one of the main sidearms approved for use by the MPD aside from the Smith & Wesson Model 37.
Assault Rifles
AK-47
Unknown individuals are seen fighting in Japan with AK-47s in a flashback sequence in "Masked Mansion". In the Episode 0 movie, a fake video planted by Makiro Senda shows Shinjuro's Singing in the Battlefield NPO friends in a propaganda video uploaded to the internet.
Heckler & Koch 416
A HK416 is vaguely seen in amateur video feeds in "Rinroku Kaishou's Crime".
Submachine Guns
Ingram MAC-11
An Ingram MAC-11 was seen in "I'm Just Searching" when the rigged conference table revealed a MAC-11 among other weapons.
Machine Guns
Browning/Sumitomo M2HB
A Browning M2HB is seen mounted on top of an Abrams MBT in "Masked Mansion" during a flashback sequence. A Public Security Force Humvee in the Greater Tokyo Area in "House, Unmasked" on patrol while conducting surveillance also has a M2HB. It's also seen in "The Phantom Statue" on top of a Type 10 MBT.
M240 Machine Gun
In the episode "Masked Mansion", an Abrams tank can be seen armed with two M240 machine guns; an M240C mounted coaxially next to the main gun, and an M240D mounted at the Loader's hatch fitted with a gun shield.
Grenades
M67
Several M67 hand grenades are seen on a table next to the AK-47-wielding gunmen in a flashback sequence in "Masked Mansion".
Others
Taser Handcuffs
Used by Shinjuro in "The King of Paradise" after it was given to Rie originally to shock anyone in a dream state.